Publications

Scholarly Journals--Published

  • Barnes S, Chowdhury S, Gatto NM, Fraser GE, Lee GJ. Omega-3 fatty acids are associated with blood–brain barrier integrity in a healthy aging population. Brain and Behavior 2021; In Press. PMID: 34327870. (07/2021)
  • Montagne A, Nikolakopoulou AM, Huuskonen MT, Sagare AP, Lawson EJ, Lazic D, Rege SV, Grond A, Zuniga E, Barnes SR, Prince J, Sagare M, Hsu CJ, LaDu MJ, Jacobs RE, Zlokovic BV. APOE4 accelerates advanced stage vascular and neurodegenerative disorder in old Alzheimer’s mice via cyclophilin A independently of amyloid-β. Nature Aging 2021; In Press (06/2021)
  • Ahmed K, Kiang SC, Barnes S, Abou-Zamzam Jr AM, Tomihama RT. Direct contrast magnetic resonance lymphangiography in the diagnosis of persistent occult chylous effusion leak after thoracic duct embolization. J of Vascular Surgery: Venous and Lymphatic Disorders 2019; 7(2):251-257. PMID: 30553782 (03/2019)
  • Gomes C, Nelson S, Speirs J, Barnes S. Magnetic Intramedullary Lengthening Nails and MRI Compatibility. J Pediatric Orthopaedics 2018; 38(10): 584-587. PMID: 30074585 (07/2018)
  • Montagne A, Nikolakopoulou AM, Zhao Z, Sagare AP, Si G, Lazic D, Barnes SR, Daianu M, Ramanathan A, Go A, Lawson EJ, Wang Y, Mack WJ, Thompson PM, Schneider JA, Varkey J, Langen R, Mullins E, Jacobs RE, Zlokovic BV. Pericytes play a critical role in the white matter health and disease. Nature Medicine 2018; 24(3):326-337. PMID: 29400711 (06/2018)
  • Lu GJ, Farhadi A, Szablowski JO, Lee-Gosselin A, Barnes SR, Lakshmanan A, Bourdeau RW, Shapiro MG. Acoustically modulated magnetic resonance imaging of gas-filled protein nanostructures. Nature Materials 2018; 17:456-463. PMID: 29483636 (05/2018)
  • Barnes S, Ng TSC, Montagne A, Law M, Zlokovic BV, Jacobs RE. Optimal Acquisition and Modeling Parameters for Accurate Assessment of Low Ktrans Blood–Brain Barrier Permeability Using Dynamic Contrast-Enhanced MRI. Magnetic Resonance in Medicine 2016; 17:1967-1977. PMID: 26077645 (07/2015)
  • Barnes S, Ng TSC, Santa-Maria N, Montagne A, Zlokovic BV, Jacobs RE. ROCKETSHIP: a flexible and modular software tool for the planning, processing and analysis of dynamic MRI studies. BMC Medical Imaging 2015; 15(1):19. PMID: 26076957 (07/2015)
  • Montagne A, Barnes S, Sweeney MD, Halliday MR, Sagare AP, Zhao Z, Toga AW, Jacobs RE, Chui HC, Law M, Zlokovic BV. Blood-Brain Barrier Breakdown in the Aging Human Hippocampus. Neuron 2015; 85:296-3-2. PMID: 25611508 (01/2015)
  • Santa Maria N, Barnes S, Jacobs R. In vivo monitoring of natural killer cell trafficking during tumor immunotherapy. Magnetic Resonance Insights 2014; 7:12-21. PMID 25114550 (10/2014)
  • Choy M, Dubé C, Patterson K, Barnes S, Mares P, Blood A, Hasso A, Obenaus A, Baram T. A novel, non-invasive, predictive epilepsy marker with clinical potential. Journal of Neuroscience 2014; 34(26):8672-84. PMID: 24966369 (08/2014)
  • Barnes S, McAuley G, Slater JM, Wroe AJ. The Effects of Mapping CT Images to Monte Carlo Materials on GEANT4 Proton Simulation Accuracy. Medical Physics 2013; 40(4):041701. PMID: 23556871 (07/2013)
  • Nathoo N, Agrawal S, Wu Y, Jaylock-Jacobs S, Yong VW, Foniok T, Barnes S, Obenaus A, Dunn JF. Susceptibility-weighted imaging in the experimental autoimmune encephalomyelitis model of multiple sclerosis indicates elevated deoxyhemoglobin, iron deposition and demyelination. Multiple Sclerosis Journal 2013; 19(6):721-32. PMID: 23027879 (07/2013)
  • McAuley G, Barnes S, Slater J, Wroe A. Monte Carlo simulation of single-plane magnetically focused narrow proton beams. Physics in Medicine and Biology 2013; 58: 535-53. PMID: 23306185 (07/2013)
  • Wroe AJ, Schulte RW, Barnes S, Rightnar S, McAuley G, Slater JD, Slater JM. Proton Beam Scattering System Optimization for Clinical and Research Applications. Medical Physics 2013; 40(4):041702. PMID: 23556872 (07/2013)
  • Blasiak B, Barnes S, Foniok T, Rushforth D, Matyas  J, Ponjevic  D, Weglarz WP, Tyson T, Iqbal U, Abulrob A, Sutherland GR, Obenaus A, Tomanek B. Comparison of T2 and T2*-weighted MR molecular imaging of a mouse model of glioma. BMC Medical Imaging 2013; 13:20-28. PMCID: PMC3726375 (07/2013)
  • Chang K, Barnes S,  Haacke EM, Grossman RI, Ge Y. Imaging the Effects of Oxygen Saturation Changes in Voluntary Apnea and Hyperventilation on Susceptibility Weighted Imaging. AJNR 2013; 35(6):1091-5. PMID: 24371029 (07/2013)
  • McAuley G, Schrag M, Barnes S, Obenaus A, Dickson A, Kirsch W. In Vivo Iron Quantification in Collagenase-Induced Microbleeds in Rat Brain. MRM 2012; 67(3): 711-7. PMID: 21721041 (07/2012)
  • Barnes S, Haacke EM, Ayaz M, Boikov AS, Kirsch W, Kido D. Semiautomated detection of cerebral microbleeds in magnetic resonance images.  MRI 2011; 29(6): 844-52. PMCID: PMC3118856 (07/2011)
  • Ge Y, Barnes S, Heller S, Sodickson D, Tang L, Haacke EM, Dai J, Grossman RI. Three-dimensional high resolution venography using susceptibility weighted imaging at 7T. Chin J Magn Reson Imaging 2010; 1(2):83-93. (07/2010)
  • McAuley G, Schrag M, Barnes S, Obenaus A, Dickson A, Holshouser B, Kirsch W. Iron Quantification of Microbleeds in Postmortem Brain. MRM 2010; 65(6): 1592-601. PMID: 21590801 (07/2010)
  • Yang Q, Liu J, Barnes S, Wu Z, Li KC, Neelavalli J, Hu J, Haacke EM. 2009. Imaging the Vessel Wall in Major Peripheral Arteries using Susceptibility Weighted Imaging: Visualizing Calcifications. JMRI 2009; 30: 357-365. PMCID: PMC2730889 (07/2009)
  • Barnes S, Haacke EM. The settling properties of venous blood demonstrated in the peripheral vasculature using SWI.  JMRI 2009; 29: 1465-1470. PMID: 19472423 (07/2009)
  • Barnes S, Haacke EM. Susceptibility-Weighted Imaging: Clinical Angiographic Applications.  Magn Reson Imaging Clin N Am 2009; 17(1): 47-61. PMCID: PMC2713115 (07/2009)

Books and Chapters

  • Barnes S, Haacke EM. Susceptibility Weighted Imaging and Venography. In: Carr JC, Carroll TJ, eds. Magnetic Resonance Angiography: Principles and Applications. Springer; 2012: 157-167. (07/2012)
  • Obenaus A, Barnes S. Neuroimaging Assessment of Subarachnoid Hemorrhage. In: Chen J, Xu X, Xu Z, Zhang J, eds. Animal Models of Acute Neurological Injuries II Injury and Mechanical Assessments, Volume 1. Springer; 2012: 441-455. (07/2012)
  • Deistung A, Barnes S, Ge Y, Reichenbach J. Susceptibility Weighted Imaging at Ultrahigh Magnetic Fields. In: Haacke EM, Reichenbach J, eds. MRI Susceptibility Weighted Imaging: Basic Concepts and Clinical Applications: Wiley; 2011: 325-345. (07/2011)
  • Qi Y, Barnes S, Haacke EM. Visualizing the Vessel Wall Using Susceptibility Weighted Imaging. In: Haacke EM, Reichenbach J, eds. MRI Susceptibility Weighted Imaging: Basic Concepts and Clinical Applications: Wiley; 2011: 301-312. (07/2011)
  • Barnes S, Jin Z, Du YP, Deistung A. MR Angiography and Venography of the Brain. In: Haacke EM, Reichenbach J, eds. MRI Susceptibility Weighted Imaging: Basic Concepts and Clinical Applications: Wiley; 2011: 87-102. (07/2011)
  • Barnes S, Barth M, Koopmans P. Automatic Vein Segmentation and Lesion Detection: From SWI-MIPS to MR Venograms. In: Haacke EM, Reichenbach J, eds. MRI Susceptibility Weighted Imaging: Basic Concepts and Clinical Applications: Wiley; 2011: 605-618. (07/2011)
  • Haacke EM, Boikov AS, Barnes S, Neelavalli J, Kahn MA. Susceptibility-weighted imaging. In: Weering DJ, ed. Cerebral Microbleeds: Cambridge University Press; 2011: 22-33. (07/2011)